TitleDateReferenceDOI
Variability in porcine microRNA genes and its association with mRNA expression and lipid phenotypes2021-05-04Mármol-Sánchez, E; Luigi-Sierra, MG; Castelló, A; Guan, DL; Quintanilla, R; Tonda, R; Amills, M (2021). Variability in porcine microRNA genes and its association with mRNA expression and lipid phenotypes. Genetics Selection Evolution, 53(1), 43-. DOI: 10.1186/s12711-021-00632-3https://doi.org/10.1186/s12711-021-00632-3
Single human oocyte transcriptome analysis reveals distinct maturation stage-dependent pathways impacted by age2021-05-01Llonch, S; Barragán, M; Nieto, P; Mallol, A; Elosua-Bayes, M; Lorden, P; Ruiz, S; Zambelli, F; Heyn, H; Vassena, R; Payer, B (2021). Single human oocyte transcriptome analysis reveals distinct maturation stage-dependent pathways impacted by age. Aging Cell, 20(5), e13360-. DOI: 10.1111/acel.13360https://doi.org/10.1111/acel.13360
Copy number variation underlies complex phenotypes in domestic dog breeds and other canids2021-05-01Serres-Armero, A; Davis, BW; Povolotskaya, IS; Morcillo-Suarez, C; Plassais, J; Juan, DV; Ostrander, EA; Marques-Bonet, T (2021). Copy number variation underlies complex phenotypes in domestic dog breeds and other canids. Genome Research, 31(5), 762-774. DOI: 10.1101/gr.266049.120https://doi.org/10.1101/gr.266049.120
Towards complete and error-free genome assemblies of all vertebrate species2021-04-29Rhie, A; McCarthy, SA; Fedrigo, O; Damas, J; Formenti, G; Koren, S; Uliano-Silva, M; Chow, W; Fungtammasan, A; Kim, J; Lee, C; Ko, BJ; Chaisson, M; Ge (2021). Towards complete and error-free genome assemblies of all vertebrate species. Nature, 592(7856), 737-+. DOI: 10.1038/s41586-021-03451-0https://doi.org/10.1038/s41586-021-03451-0
NADPH oxidase 4 (Nox4) deletion accelerates liver regeneration in mice2021-04-01Herranz-Itúrbide, M; López-Luque, J; Gonzalez-Sanchez, E; Caballero-Díaz, D; Crosas-Molist, E; Martín-Mur, B; Gut, M; Esteve-Codina, A; Jaquet, V; Jia (2021). NADPH oxidase 4 (Nox4) deletion accelerates liver regeneration in mice. Redox Biology, 40(), 101841-. DOI: 10.1016/j.redox.2020.101841https://doi.org/10.1016/j.redox.2020.101841
Maximizing the acquisition of unique reads in noninvasive capture sequencing experiments2021-04-01Fontsere, C; Alvarez-Estape, M; Lester, J; Arandjelovic, M; Kuhlwilm, M; Dieguez, P; Agbor, A; Angedakin, S; Ayimisin, EA; Bessone, M; Brazzola, G; De (2021). Maximizing the acquisition of unique reads in noninvasive capture sequencing experiments. Molecular Ecology Resources, 21(3), 745-761. DOI: 10.1111/1755-0998.13300https://doi.org/10.1111/1755-0998.13300
Genetic lesions in MYC and STAT3 drive oncogenic transcription factor overexpression in plasmablastic lymphoma2021-04-01Garcia-Reyero, J; Magunacelaya, NM; de Villambrosia, SG; Loghavi, S; Mediavilla, AG; Tonda, R; Beltran, S; Gut, M; Gonzalez, AP; D'Amore, E; Visco, C; (2021). Genetic lesions in MYC and STAT3 drive oncogenic transcription factor overexpression in plasmablastic lymphoma. Haematologica, 106(4), 1120-1128. DOI: 10.3324/haematol.2020.251579https://doi.org/10.3324/haematol.2020.251579
Comprehensive identification of somatic nucleotide variants in human brain tissue2021-03-29Wang, YF; Bae, T; Thorpe, J; Sherman, MA; Jones, AG; Cho, SA; Daily, K; Dou, YM; Ganz, J; Galor, A; Lobon, I; Pattni, R; Rosenbluh, C; Tomasi, S; Toma (2021). Comprehensive identification of somatic nucleotide variants in human brain tissue. Genome Biology, 22(1), 92-. DOI: 10.1186/s13059-021-02285-3https://doi.org/10.1186/s13059-021-02285-3
Immune cell profiling of the cerebrospinal fluid enables the characterization of the brain metastasis microenvironment2021-03-08Rubio-Perez, C; Planas-Rigol, E; Trincado, JL; Bonfill-Teixidor, E; Arias, A; Marchese, D; Moutinho, C; Serna, G; Pedrosa, L; Iurlaro, R; Martínez-Ric (2021). Immune cell profiling of the cerebrospinal fluid enables the characterization of the brain metastasis microenvironment. Nature Communications, 12(1), 1503-. DOI: 10.1038/s41467-021-21789-xhttps://doi.org/10.1038/s41467-021-21789-x
3D reconstruction of genomic regions from sparse interaction data2021-03-01Mendieta-Esteban, J; Di Stefano, M; Castillo, D; Farabella, I; Marti-Renom, MA (2021). 3D reconstruction of genomic regions from sparse interaction data. Nar Genom Bioinform, 3(1), lqab017-. DOI: 10.1093/nargab/lqab017https://doi.org/10.1093/nargab/lqab017
TADs enriched in histone H1.2 strongly overlap with the B compartment, inaccessible chromatin, and AT-rich Giemsa bands2021-03-01Serna-Pujol, N; Salinas-Pena, M; Mugianesi, F; Lopez-Anguita, N; Torrent-Llagostera, F; Izquierdo-Bouldstridge, A; Marti-Renom, MA; Jordan, A (2021). TADs enriched in histone H1.2 strongly overlap with the B compartment, inaccessible chromatin, and AT-rich Giemsa bands. Febs Journal, 288(6), 1989-2013. DOI: 10.1111/febs.15549https://doi.org/10.1111/febs.15549
Combining Nanopore and Illumina Sequencing Permits Detailed Analysis of Insertion Mutations and Structural Variations Produced by PEG-Mediated Transformation in Ostreococcus tauri2021-03-01Thomy, J; Sanchez, F; Gut, M; Cruz, F; Alioto, T; Piganeau, G; Grimsley, N; Yau, S (2021). Combining Nanopore and Illumina Sequencing Permits Detailed Analysis of Insertion Mutations and Structural Variations Produced by PEG-Mediated Transformation in Ostreococcus tauri. Cells, 10(3), 664-22. DOI: 10.3390/cells10030664https://doi.org/10.3390/cells10030664
The effect of age on the acquisition and selection of cancer driver mutations in sun-exposed normal skin2021-03-01Hernando, B; Dietzen, M; Parra, G; Gil-Barrachina, M; Pitarch, G; Mahiques, L; Valcuende-Cavero, F; McGranahan, N; Martinez-Cadenas, C (2021). The effect of age on the acquisition and selection of cancer driver mutations in sun-exposed normal skin. Annals Of Oncology, 32(3), 412-421. DOI: 10.1016/j.annonc.2020.11.023https://doi.org/10.1016/j.annonc.2020.11.023
Discovery of SNP markers of red shrimp Aristeus antennatus for population structure in Western Mediterranean Sea2021-03-01Catanese, G; Trotta, JR; Iriondo, M; Grau, AM; Estonba, A (2021). Discovery of SNP markers of red shrimp Aristeus antennatus for population structure in Western Mediterranean Sea. Conservation Genetics Resources, 13(1), 21-25. DOI: 10.1007/s12686-020-01178-0https://doi.org/10.1007/s12686-020-01178-0
Shorter androgen receptor polyQ alleles protect against life-threatening COVID-19 disease in European males2021-03-01Baldassarri, M; Picchiotti, N; Fava, F; Fallerini, C; Benetti, E; Daga, S; Valentino, F; Doddato, G; Furini, S; Giliberti, A; Tita, R; Amitrano, S; Br (2021). Shorter androgen receptor polyQ alleles protect against life-threatening COVID-19 disease in European males. Ebiomedicine, 65(), 103246-. DOI: 10.1016/j.ebiom.2021.103246https://doi.org/10.1016/j.ebiom.2021.103246
Polymer modelling unveils the roles of heterochromatin and nucleolar organizing regions in shaping 3D genome organization in Arabidopsis thaliana2021-02-26Di Stefano, M; Nützmann, HW; Marti-Renom, MA; Jost, D (2021). Polymer modelling unveils the roles of heterochromatin and nucleolar organizing regions in shaping 3D genome organization in Arabidopsis thaliana. Nucleic Acids Research, 49(4), 1840-1858. DOI: 10.1093/nar/gkaa1275https://doi.org/10.1093/nar/gkaa1275
The genomics of ecological flexibility, large brains, and long lives in capuchin monkeys revealed with fecalFACS2021-02-16Orkin, JD; Montague, MJ; Tejada-Martinez, D; de Manuel, M; del Campo, J; Hernandez, SC; Di Fiore, A; Fontsere, C; Hodgson, JA; Janiak, MC; Kuderna, LF (2021). The genomics of ecological flexibility, large brains, and long lives in capuchin monkeys revealed with fecalFACS. Proceedings Of The National Academy Of Sciences Of The United States Of America, 118(7), e2010632118-. DOI: 10.1073/pnas.2010632118https://doi.org/10.1073/pnas.2010632118
Modeling Human TBX5 Haploinsufficiency Predicts Regulatory Networks for Congenital Heart Disease2021-02-08Kathiriya, IS; Rao, KS; Iacono, G; Devine, WP; Blair, AP; Hota, SK; Lai, MH; Garay, B; Thomas, R; Gong, HZ; Wasson, LK; Goyal, P; Sukonnik, T; Hu, KM; (2021). Modeling Human TBX5 Haploinsufficiency Predicts Regulatory Networks for Congenital Heart Disease. Developmental Cell, 56(3), 292-+. DOI: 10.1016/j.devcel.2020.11.020https://doi.org/10.1016/j.devcel.2020.11.020
De novo PORCN and ZIC2 mutations in a highly consanguineous family2021-02-01Castilla-Vallmanya, L; Gürsoy, S; Giray-Bozkaya, Ö; Prat-Planas, A; Bullich, G; Matalonga, L; Centeno-Pla, M; Rabionet, R; Grinberg, D; Balcells, S; U (2021). De novo PORCN and ZIC2 mutations in a highly consanguineous family. International Journal Of Molecular Sciences, 22(4), 1549-10. DOI: 10.3390/ijms22041549https://doi.org/10.3390/ijms22041549
A multilayered post-GWAS assessment on genetic susceptibility to pancreatic cancer2021-02-01de Maturana, EL; Rodríguez, JA; Alonso, L; Lao, O; Molina-Montes, E; Martín-Antoniano, IA; Gómez-Rubio, P; Lawlor, R; Carrato, A; Hidalgo, M; Iglesias (2021). A multilayered post-GWAS assessment on genetic susceptibility to pancreatic cancer. Genome Medicine, 13(1), 15-. DOI: 10.1186/s13073-020-00816-4https://doi.org/10.1186/s13073-020-00816-4