TOTAL NO. PUBLICATIONS: 413
  • Potential damaging mutation in LRP5 from genome sequencing of the first reported chimpanzee with the Chiari malformation

  • Solis-Moruno M, de Manuel M, Hernandez-Rodriguez J, Fontsere C, Gomara-Castaño A, Valsera-Naranjo C, Crailsheim D, Navarro A, Llorente M, Riera L, Feliu-Olleta O, Marques-Bonet T.

    Sci Rep. 2017 Nov 9;7(1):15224. doi: 10.1038/s41598-017-15544-w.

  • Morphometric, Behavioral, and Genomic Evidence for a New Orangutan Species

  • Nater A, Mattle-Greminger MP, Nurcahyo A, Nowak MG, de Manuel M, Desai T, Groves C, Pybus M, Sonay TB, Roos C, Lameira AR, Wich SA, Askew J, Davila-Ross M, Fredriksson G, de Valles G, Casals F, Prado-Martinez J, Goossens B, Verschoor EJ, Warren KS, Singleton I, Marques DA, Pamungkas J, Perwitasari-Farajallah D, Rianti P, Tuuga A, Gut IG, Gut M, Orozco-terWengel P, van Schaik CP, Bertranpetit J, Anisimova M, Scally A, Marques-Bonet T, Meijaard E, Krützen M.

    Curr Biol. 2017 Nov 20;27(22):3487-3498.e10. doi: 10.1016/j.cub.2017.09.047. Epub 2017 Nov 2.

  • A 3-way hybrid approach to generate a new high quality chimpanzee reference genome (Pan_tro_3.0)

  • Kuderna LFK, Tomlinson C, Hillier LW, Tran A, Fiddes I, Armstrong J, Laayouni H, Gordon D, Huddleston J, Perez RG, Povolotskaya I, Armero AS, Garrido JG, Ho D, Ribeca P, Alioto T, Green RE, Paten B, Navarro A, Betranpetit J, Herrero J, Eichler EE, Sharp AJ, Feuk L, Warren WC, Marques-Bonet T

    Gigascience. 2017 Oct 30. doi: 10.1093/gigascience/gix098. [Epub ahead of print]
  • The impact of endogenous content, replicates and pooling on genome capture from fecal samples

  • Hernandez-Rodriguez J, Arandjelovic M, Lester J, de Filippo C, Weihmann A, Meyer M, Angedakin S, Casals F, Navarro A, Vigilant L, Kühl HS, Langergraber K, Boesch C, Hughes D, Marques-Bonet T.

    Mol Ecol Resour. 2017 Oct 23. doi: 10.1111/1755-0998.12728. [Epub ahead of print]

  • Parallel sequencing lives, or what makes large sequencing projects successful

  • Quilez J, Vidal E, Dily FL, Serra F, Cuartero Y, Stadhouders R, Graf T, Marti-Renom MA, Beato M, Filion G.

    Gigascience. 2017 Oct 18. doi: 10.1093/gigascience/gix100. [Epub ahead of print]

  • Tumor-associated macrophages (TAMs) depend on ZEB1 for their cancer-promoting roles

  • Cortés M, Sanchez-Moral L, de Barrios O, Fernández-Aceñero MJ, Martínez-Campanario MC, Esteve-Codina A, Darling DS, Győrffy B, Lawrence T, Dean DC, Postigo A.

    EMBO J. 2017 Oct 16. pii: e201797345. doi: 10.15252/embj.201797345. [Epub ahead of print]

  • Biallelic mutation of UNC50, encoding a protein involved in AChR trafficking, is responsible for arthrogryposis

  • Abiusi E, D'Alessandro M, Dieterich K, Quevarec L, Turczynski S, Valfort AC, Mezin P, Jouk PS, Gut M, Gut I, Bessereau JL, Melki J.

    Hum Mol Genet. 2017 Oct 15;26(20):3989-3994. doi: 10.1093/hmg/ddx288.

  • A DNA methylation map of human cancer at single base-pair resolution

  • Vidal E, Sayols S, Moran S, Guillaumet-Adkins A, Schroeder MP, Royo R, Orozco M, Gut M, Gut I, Lopez-Bigas N, Heyn H, Esteller M.

    Oncogene. 2017 Oct 5;36(40):5648-5657. doi: 10.1038/onc.2017.176. Epub 2017 Jun 5.

  • Dual MET and ERBB inhibition overcomes intratumor plasticity in osimertinib-resistant-advanced non-small-cell lung cancer (NSCLC)

  • Martinez-Marti A, Felip E, Matito J, Mereu E, Navarro A, Cedrés S, Pardo N, Martinez de Castro A, Remon J, Miquel JM, Guillaumet-Adkins A, Nadal E, Rodriguez-Esteban G, Arqués O, Fasani R, Nuciforo P, Heyn H, Villanueva A, Palmer HG, Vivancos A

    Ann Oncol. 2017 Oct 1;28(10):2451-2457. doi: 10.1093/annonc/mdx396.

  • The utility of Next Generation Sequencing for molecular diagnostics in Rett syndrome

  • Vidal S, Brandi N, Pacheco P, Gerotina E, Blasco L, Trotta JR, Derdak S, Del Mar O'Callaghan M, Garcia-Cazorla À, Pineda M, Armstrong J; Rett Working Group.

    Sci Rep. 2017 Sep 25;7(1):12288. doi: 10.1038/s41598-017-11620-3.

  • Evaluation of single-cell genomics to address evolutionary questions using three SAGs of the choanoflagellate Monosiga brevicollis

  • López-Escardó D, Grau-Bové X, Guillaumet-Adkins A, Gut M, Sieracki ME, Ruiz-Trillo I.

    Sci Rep. 2017 Sep 8;7(1):11025. doi: 10.1038/s41598-017-11466-9.

  • Copy number rather than epigenetic alterations are the major dictator of imprinted methylation in tumors

  • Martin-Trujillo A, Vidal E, Monteagudo-Sa Nchez A, Sanchez-Delgado M, Moran S, Hernandez Mora JR, Heyn H, Guitart M, Esteller M, Monk D

    Nat Commun. 2017 Sep 7;8(1):467. doi: 10.1038/s41467-017-00639-9.

  • Challenges for visualizing three-dimensional data in genomic browsers

  • Goodstadt M, Marti-Renom MA.

    FEBS Lett. 2017 Sep;591(17):2505-2519. doi: 10.1002/1873-3468.12778. Epub 2017 Aug 24

  • 3D modeling of chromatin structure: is there a way to integrate and reconcile single cell and population experimental data?

  • Le Dily F, Serra F, Marti-Renom M

    Wiley Interdiscip Rev Comput Mol Sci. 2017 April 10. [Epub ahead of print]. DOI: 10.1002/wcms.1308

  • Histone H1 depletion triggers an interferon response in cancer cells via activation of heterochromatic repeats

  • Izquierdo-Bouldstridge A, Bustillos A, Bonet-Costa C, Aribau-Miralbés P, García-Gomis D, Dabad M, Esteve-Codina A, Pascual-Reguant L, Peiró S, Esteller M, Murtha M, Millán-Ariño L, Jordan A.

    Nucleic Acids Res. 2017 Aug 28. doi: 10.1093/nar/gkx746. [Epub ahead of print]

  • Whole exome sequencing as a diagnostic tool for patients with ciliopathy-like phenotypes

  • Castro-Sánchez S, Álvarez-Satta M, Tohamy MA, Beltran S, Derdak S, Valverde D.

    PLoS One. 2017 Aug 11;12(8):e0183081. doi: 10.1371/journal.pone.0183081. eCollection 2017.

  • Adaptive Mistranslation Accelerates the Evolution of Fluconazole Resistance and Induces Major Genomic and Gene Expression Alterations in Candida albicans

  • Weil T, Santamaría R, Lee W, Rung J, Tocci N, Abbey D, Bezerra AR, Carreto L, Moura GR, Bayés M, Gut IG, Csikasz-Nagy A, Cavalieri D, Berman J, Santos MAS.

    mSphere. 2017 Aug 9;2(4). pii: e00167-17. doi: 10.1128/mSphere.00167-17. eCollection 2017 Jul-Aug.

  • Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing

  • Mak SST, Gopalakrishnan S, Carøe C, Geng C, Liu S, Sinding MS, Kuderna LFK, Zhang W, Fu S, Vieira FG, Germonpré M, Bocherens H, Fedorov S, Petersen B, Sicheritz-Pontén T, Marques-Bonet T, Zhang G, Jiang H, Gilbert MTP.

    Gigascience. 2017 Aug 1;6(8):1-13. doi: 10.1093/gigascience/gix049.

  • Transcriptional mechanisms underlying life-history responses to climate change in the three-spined stickleback

  • Kim SY, Costa MM, Esteve-Codina A, Velando A.

    Evol Appl. 2017 May 15;10(7):718-730. doi: 10.1111/eva.12487. eCollection 2017 Aug.

  • Novel efficient genome-wide SNP panels for the conservation of the highly endangered Iberian lynx.

  • Kleinman-Ruiz D, Martínez-Cruz B, Soriano L, Lucena-Perez M, Cruz F, Villanueva B, Fernández J, Godoy JA.

    BMC Genomics. 2017 Jul 21;18(1):556. doi: 10.1186/s12864-017-3946-5.

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