TOTAL NO. PUBLICATIONS: 413
  • Comparative Analysis of Single-Cell RNA Sequencing Methods

  • Ziegenhain C, Vieth B, Parekh S, Reinius B, Guillaumet-Adkins A, Smets M, Leonhardt H, Heyn H, Hellmann I, Enard W.

    Mol Cell. 2017 Feb 16;65(4):631-643.e4. doi: 10.1016/j.molcel.2017.01.023.

  • Mutations in TRAPPC11 are associated with a congenital disorder of glycosylation

  • Matalonga L, Bravo M, Serra-Peinado C, García-Pelegrí E, Ugarteburu O, Vidal S, Llambrich M, Quintana E, Fuster-Jorge P, Gonzalez-Bravo MN, Beltran S, Dopazo J, Garcia-Garcia F, Foulquier F, Matthijs G, Mills P, Ribes A, Egea G, Briones P, Tort F, Girós M.

    Hum Mutat. 2017 Feb;38(2):148-151. doi: 10.1002/humu.23145. Epub 2016 Nov 26.

  • Evidence that the rate of strong selective sweeps increases with population size in the great apes

  • Nam K, Munch K, Mailund T, Nater A, Greminger MP, Krützen M, Marquès-Bonet T, Schierup MH.

    Proc Natl Acad Sci U S A. 2017 Jan 30. pii: 201605660. doi: 10.1073/pnas.1605660114. [Epub ahead of print]

  • A novel translational control mechanism involving RNA structures within coding sequences

  • Jungfleisch J, Nedialkova DD, Dotu I, Sloan KE, Martinez-Bosch N, Brüning L, Raineri E, Navarro P, Bohnsack MT, Leidel SA, Díez J.

    Genome Res. 2017 Jan;27(1):95-106. doi: 10.1101/gr.209015.116. Epub 2016 Nov 7.

  • Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types

  • Ecker S, Chen L, Pancaldi V, Bagger FO, Fernández JM, Carrillo de Santa Pau E, Juan D, Mann AL, Watt S, Casale FP, Sidiropoulos N, Rapin N, Merkel A; BLUEPRINT Consortium, Stunnenberg HG, Stegle O, Frontini M, Downes K, Pastinen T, Kuijpers TW, Rico D, Valencia A, Beck S, Soranzo N, Paul D.

    Genome Biol. 2017 Jan 26;18(1):18. doi: 10.1186/s13059-017-1156-8.

  • A Comparison of RNA-Seq Results from Paired Formalin-Fixed Paraffin-Embedded and Fresh-Frozen Glioblastoma Tissue Samples

  • Esteve-Codina A, Arpi O, Martinez-García M, Pineda E, Mallo M, Gut M, Carrato C, Rovira A, Lopez R, Tortosa A, Dabad M, Del Barco S, Heath S, Bagué S, Ribalta T, Alameda F, de la Iglesia N, Balaña C; GLIOCAT Group.

    PLoS One. 2017 Jan 25;12(1):e0170632. doi: 10.1371/journal.pone.0170632. eCollection 2017.

  • Splenic diffuse red pulp small B-cell lymphoma displays increased expression of cyclin D3 and recurrent CCND3 mutations

  • Curiel-Olmo S, Mondéjar R, Almaraz C, Mollejo M, Cereceda L, Marès R, Derdak S, Campos-Martín Y, Batlle A, González de Villambrosía S, Gut M, Blanc J, Traverse-Glehen A, Verney A, Baseggio L, Camacho FI, Wotherspoon A, Stamatopoulos K, Xochelli A, Papadaki T, Kanellis G, Ponzoni M, García-Cosío M, Vaqué JP, Beltrán S, Gut I, Piris MA, Martínez N.

    Blood. 2017 Feb 23;129(8):1042-1045. doi: 10.1182/blood-2016-11-751024. Epub 2017 Jan 9.

  • Benchmarking of Whole Exome Sequencing and Ad Hoc Designed Panels for Genetic Testing of Hereditary Cancer

  • Feliubadaló L, Tonda R, Gausachs M, Trotta JR, Castellanos E, López-Doriga A, Teulé À, Tornero E, Del Valle J, Gel B, Gut M, Pineda M, González S, Menéndez M, Navarro M, Capellá G, Gut I, Serra E, Brunet J, Beltran S, Lázaro C.

    Sci Rep. 2017 Jan 4;7:37984. doi: 10.1038/srep37984.

  • ChimPipe: accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data

  • Rodríguez-Martín B, Palumbo E, Marco-Sola S, Griebel T, Ribeca P, Alonso G, Rastrojo A, Aguado B, Guigó R, Djebali S.

    BMC Genomics. 2017 Jan 3;18(1):7. doi: 10.1186/s12864-016-3404-9.

  • A family-based genome-wide association study reveals an association of spondyloarthritis with MAPK14

  • Costantino F, Talpin A, Said-Nahal R, Leboime A, Zinovieva E, Zelenika D, Gut I, Charon C, Izac B, Weissman M, Chiocchia G, Reveille J, Breban M, Garchon HJ.

    Ann Rheum Dis. 2017 Jan;76(1):310-314. doi: 10.1136/annrheumdis-2016-209449. Epub 2016 Jul 26.

  • Shared Oncogenic Pathways Implicated in Both Virus-Positive and UV-Induced Merkel Cell Carcinomas

  • González-Vela MD, Curiel-Olmo S, Derdak S, Beltran S, Santibañez M, Martínez N, Castillo-Trujillo A, Gut M, Sánchez-Pacheco R, Almaraz C, Cereceda L, Llombart B, Agraz-Doblas A, Revert-Arce J, López Guerrero JA, Mollejo M, Marrón PI, Ortiz-Romero P, Fernandez-Cuesta L, Varela I, Gut I, Cerroni L, Piris MÁ, Vaqué JP.

    J Invest Dermatol. 2017 Jan;137(1):197-206. doi: 10.1016/j.jid.2016.08.015. Epub 2016 Sep 1.

  • Single-Cell Genomics Unravels Brain Cell-Type Complexity (Book Chapter)

  • Guillaumet-Adkins A, Heyn H.

    Adv Exp Med Biol. 2017;978:393-407. doi: 10.1007/978-3-319-53889-1_20.
  • Evolution of complex traits in human populations. In Evolutionary Biology: Self/nonself evolution, species and compex traits evolution, methods and concepts. (Book Chapter)

  • Carolina Medina-Gomez, Oscar Lao and Fernando Rivadeneira.

    Pierre Pontarotti Editor. Editorial Springer. ISBN 978-3-319-61569-1

  • Molecular Techniques for DNA Methylation Studies, in Molecular Diagnostics (Book Chapter)

  • Tost J, Gut IG.

    Edited by George P. Patrinos, Philip B. Danielson and Wilhelm J. Ansorge. ISBN: 978-0-12-802971-8. Copyright © 2017 Elsevier Ltd.

  • Quantitative DNA Methylation Analysis at Single-Nucleotide Resolution by Pyrosequencing® (Book Chapter)

  • Busato F, Dejeux E, El Abdalaoui H, Gut IG, Tost J.

    Methods Mol Biol. 2018;1708:427-445. doi: 10.1007/978-1-4939-7481-8_22.

  • Novel Candidate Genes and a Wide Spectrum of Structural and Point Mutations Responsible for Inherited Retinal Dystrophies Revealed by Exome Sequencing

  • de Castro-Miró M, Tonda R, Escudero-Ferruz P et al.

    PLoS One. 2016 Dec 22;11(12):e0168966. doi: 10.1371/journal.pone.0168966. eCollection 2016.

  • Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx

  • Abascal F, Corvelo A, Cruz F et al including Frias L, Ribeca P, Derdak S, Blanc J, Gut M, Gut I, Marques-Bonet T, Alioto T.

    Genome Biol. 2016 Dec 14;17(1):251.

  • Genetic Diversity and Population Structure of Rice Varieties Cultivated in Temperate Regions

  • Reig-Valiente JL, Viruel J, Sales E et al including Gut M, Deardak S.

    Rice (N Y). 2016 Dec;9(1):58. Epub 2016 Oct 20.

  • Evolution and demography of the great apes

  • Kuhlwilm M, de Manuel M, Nater A, Greminger MP, Krützen M, Marques-Bonet T.

    Curr Opin Genet Dev. 2016 Dec;41:124-129. doi: 10.1016/j.gde.2016.09.005. Epub 2016 Oct 4.

  • From Wet-Lab to Variations: Concordance and Speed of Bioinformatics Pipelines for Whole Genome and Whole Exome Sequencing

  • Laurie S, Fernandez-Callejo M, Marco-Sola S, Trotta JR, Camps J, Chacón A, Espinosa A, Gut M, Gut I, Heath S, Beltran S.

    Hum Mutat. 2016 Dec;37(12):1263-1271. doi: 10.1002/humu.23114. Epub 2016 Sep 26.

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